Contact
For administrative calls, please contact:
Programs
Departments & Divisions
Research
Currently seeking M.S. students.
Professor & Chair
Department of Cell Systems and Anatomy
We focus on the DNA base excision repair pathway and its ability to repair spontaneous and induced DNA damage as relevant to hepatocellular carcinoma, germ cell mutations, and mitochondrial DNA stability. A multipronged approach involving stem cells, germ cells, hepatocytes, animal models, molecular biology, cell biology, aging and genetics is employed to determine how base excision repair goes awry and results in disease. We seek to define the key regulators that become dysfunctional in disease and identify molecular targets that may be useful in correcting the repair deficiency for the long-term goals of preventing and reducing disease in which base excision repair is a key factor.
Related Disease: Hepatocellular carcinoma, de novo genetic diseases in children (e.g. achondroplasia, autism spectrum disorder), genetic diseases caused by mitochondrial DNA mutations
Techniques: Next-generation sequencing, computational biology, CometChip assays, cell culture, general molecular and cell biology techniques, proximity labeling
We focus on the DNA base excision repair pathway as relevant to hepatocellular carcinoma, germ cell mutations, and mitochondrial DNA stability. Her laboratory discovered that AP endonuclease 1 is a critical factor in these processes using a mouse model. A multipronged approach involving stem cells, germ cells, hepatocytes, animal models, molecular biology, cell biology, and genetics is used. Related Diseases: Hepatocellular carcinoma, de novo genetic diseases in children (e.g., achondroplasia, autism spectrum disorder). Techniques: CometChip assays, cell culture, general molecular and cell biology techniques, proximity labeling of interacting proteins
NIH R01 ES015869: Shcherbakova (PI), Walter (Subcontract PI); 09/01/2019-08/31/2020; Translesion synthesis DNA polymerases and genome instability.
NIH R56 AG052581: Walter (PI); 09/30/2017 – 08/31/2020; Tumor Suppressors Mediate a Reduction in Male Gamete Quality with Aging.
Barshop Institute Pilot Grant: (Walter-PI); 08/15/2020 – 06/30/2021; The APEX1 interactome in germ cell aging.